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AuthorTitleYearJournal/ProceedingsReftypeDOI/URL
Acar, E., Gurdeniz, G., Rasmussen, M.A., Rago, D., Dragsted, L.O. and Bro, R. Coupled Matrix Factorization with Sparse Factors to Identify Potential Biomarkers in Metabolomics 2012 International Journal of Knowledge Discovery in Bioinformatics
Vol. 3(3), pp. 22-43 
article URL 
BibTeX:
@article{2012_CMF,
  author = {E. Acar and G. Gurdeniz and M. A. Rasmussen and D. Rago and L. O. Dragsted and R. Bro},
  title = {Coupled Matrix Factorization with Sparse Factors to Identify Potential Biomarkers in Metabolomics},
  journal = {International Journal of Knowledge Discovery in Bioinformatics},
  year = {2012},
  volume = {3},
  number = {3},
  pages = {22-43},
  url = {http://www.igi-global.com/article/coupled-matrix-factorization-sparse-factors/77809}
}
Acar, E., Lawaetz, A.J., Rasmussen, M.A. and Bro, R. Structure-Revealing Data Fusion Model with Applications in Metabolomics 2013 EMBS'13: Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, pp. 6023-6026  inproceedings URL 
BibTeX:
@inproceedings{2013_EMBS,
  author = {E. Acar and A. J. Lawaetz and M. A. Rasmussen and R. Bro},
  title = {Structure-Revealing Data Fusion Model with Applications in Metabolomics},
  booktitle = {EMBS'13: Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society},
  year = {2013},
  pages = {6023-6026},
  url = {http://www.models.life.ku.dk/~acare/ACMTF_EMBS2013}
}
Allen, G.I. and Savatic, M.M. Sparse non-negative generalized PCA with applications to metabolomics 2011 Bioinformatics
Vol. 27, pp. 3029-3035 
article URL 
BibTeX:
@article{AlSa11,
  author = {G. I. Allen and M. Maletic - Savatic},
  title = {Sparse non-negative generalized PCA with applications to metabolomics},
  journal = {Bioinformatics},
  year = {2011},
  volume = {27},
  pages = {3029-3035},
  url = {http://bioinformatics.oxfordjournals.org/content/early/2011/09/19/bioinformatics.btr522}
}
Altmaier, E., Kastenmuller, G., Romisch-Margl, W., Thorand, B., Weinberger, K.M., Illig, T., Adamski, J., Doring, A. and Suhre, K. Questionnaire-based self-reported nutrition habits associate with serum metabolism as revealed by quantitative targeted metabolomics 2011 European Journal of Epidemiology
Vol. 26, pp. 145-156 
article DOI  
BibTeX:
@article{AlKa11,
  author = {E. Altmaier and G. Kastenmuller and W. Romisch-Margl and B. Thorand and K. M. Weinberger and T. Illig and J. Adamski and A. Doring and K. Suhre},
  title = {Questionnaire-based self-reported nutrition habits associate with serum metabolism as revealed by quantitative targeted metabolomics},
  journal = {European Journal of Epidemiology},
  year = {2011},
  volume = {26},
  pages = {145-156},
  doi = {http://doi.org/10.1007/s10654-010-9524-7}
}
Andersen, M.-B.S., Kristensen, M., Manach, C., Pujos-Guillot, E., Poulsen, S.K., Larsen, T.M., Astrup, A. and Dragsted, L.O. Discovery and validation of urinary exposure markers for different plant foods by untargeted metabolomics 2014 Analytical and Bioanalytical Chemistry
Vol. 406, pp. 1829-1844 
article DOI  
BibTeX:
@article{AnKrMaGu14,
  author = {Maj-Britt S. Andersen and M. Kristensen and C. Manach and E. Pujos-Guillot and S. Kellebjerg Poulsen and T. M. Larsen and A. Astrup and L. O. Dragsted},
  title = {Discovery and validation of urinary exposure markers for different plant foods by untargeted metabolomics},
  journal = {Analytical and Bioanalytical Chemistry},
  year = {2014},
  volume = {406},
  pages = {1829-1844},
  doi = {http://doi.org/10.1007/s00216-013-7498-5}
}
Andersen, M.-B.S., Rinnan, A., Manach, C., Poulsen, S.K., Pujos-Guillot, E., Larsen, T.M., Astrup, A. and Dragsted, L.O. Untargeted Metabolomics as a Screening Tool for Estimating Compliance to a Dietary Pattern 2014 Journal of Proteome Research
Vol. 13, pp. 1405-1418 
article DOI  
BibTeX:
@article{AnRiMa14,
  author = {Maj-Britt S. Andersen and A. Rinnan and C. Manach and S. K. Poulsen and E. Pujos-Guillot and T. M. Larsen and A. Astrup and L. O. Dragsted},
  title = {Untargeted Metabolomics as a Screening Tool for Estimating Compliance to a Dietary Pattern},
  journal = {Journal of Proteome Research},
  year = {2014},
  volume = {13},
  pages = {1405-1418},
  doi = {http://doi.org/10.1021/pr400964s}
}
Asiago, V.M., Alvarado, L.Z., Shanaiah, N., Gowda, G.N., Owusu-Sarfo, K., Ballas, R.A. and Raftery, D. Early Detection of Recurrent Breast Cancer Using Metabolite Profiling 2010 Cancer Research, pp. 8309-8318  article URL 
BibTeX:
@article{AsAlSh10,
  author = {Vincent M. Asiago and Leiddy Z. Alvarado and Narasimhamurthy Shanaiah and G.A. Nagana Gowda and Kwadwo Owusu-Sarfo and Robert A. Ballas and Daniel Raftery},
  title = {Early Detection of Recurrent Breast Cancer Using Metabolite Profiling},
  journal = {Cancer Research},
  year = {2010},
  pages = {8309-8318},
  url = {http://cancerres.aacrjournals.org/content/70/21/8309.short}
}
Barton, R.H. A decade of advances in metabonomics 2011 Expert Opin Drug Metab Toxicol.
Vol. 7, pp. 129-136 
article URL 
BibTeX:
@article{Ba11,
  author = {R. H. Barton},
  title = {A decade of advances in metabonomics},
  journal = {Expert Opin Drug Metab Toxicol.},
  year = {2011},
  volume = {7},
  pages = {129-136},
  url = {http://informahealthcare.com/doi/abs/10.1517/17425255.2011.547473}
}
van den Berg, R.A., Hoefsloot, H.C., Westerhuis, J.A., Smilde, A.K. and der Werf, M.J.V. Centering, scaling and transformations: improving the biological information content of metabolomics data 2006 BMC Genomics
Vol. 7:142 
article URL 
BibTeX:
@article{BeHoWeSmWe06,
  author = {Robert A. van den Berg and Huub CJ Hoefsloot and Johan A Westerhuis and Age K. Smilde and Mariet J. Van der Werf},
  title = {Centering, scaling and transformations: improving the biological information content of metabolomics data},
  journal = {BMC Genomics},
  year = {2006},
  volume = {7:142},
  url = {http://www.biomedcentral.com/1471-2164/7/142}
}
van den Berg, R.A., Rubingh, C.M., Westerhuis, J.A., van der Werf, M.J. and Smilde, A. Metabolomics data exploration guided by prior knowledge 2009 Analytica Chimica Acta
Vol. 651, pp. 173-181 
article DOI  
BibTeX:
@article{BeRuWe09,
  author = {R. A. van den Berg and C. M. Rubingh and J. A. Westerhuis and M. J. van der Werf and A.K. Smilde},
  title = {Metabolomics data exploration guided by prior knowledge},
  journal = {Analytica Chimica Acta},
  year = {2009},
  volume = {651},
  pages = {173-181},
  doi = {http://doi.org/10.1016/j.aca.2009.08.029}
}
Blanchet, L., Smolinska, A., Attali, A., Stoop, M.P., Ampt, K.A.M., van Aken, H., Suidgeest, E., Tuinstra, T., Wijmenga, S.S., Luider, T. and Buydens, L.M.C. Fusion of metabolomics and proteomics data for biomarkers discovery: case study on the experimental autoimmune encephalomyelitis 2011 BMC Bioinformatics
Vol. 12, pp. 254 
article DOI  
BibTeX:
@article{BlSmAt11,
  author = {L. Blanchet and A. Smolinska and A. Attali and M. P. Stoop and K. A. M. Ampt and H. van Aken and E. Suidgeest and T. Tuinstra and S. S. Wijmenga and T. Luider and L. M. C. Buydens},
  title = {Fusion of metabolomics and proteomics data for biomarkers discovery: case study on the experimental autoimmune encephalomyelitis},
  journal = {BMC Bioinformatics},
  year = {2011},
  volume = {12},
  pages = {254},
  doi = {http://doi.org/10.1186/1471-2105-12-254}
}
Blekherman, G., Laubenbacher, R., Cortes, D.F., Mendes, P., Torti, F.M., Akman, S., Torti, S.V. and Shulaev, V. Bioinformatics tools for cancer metabolomics 2011 Metabolomics
Vol. 7, pp. 329-343 
article URL 
BibTeX:
@article{BlLaCo11,
  author = {Grigoriy Blekherman and Reinhard Laubenbacher and Diego F. Cortes and Pedro Mendes and Frank M. Torti and Steven Akman and Suzy V. Torti and Vladimir Shulaev},
  title = {Bioinformatics tools for cancer metabolomics},
  journal = {Metabolomics},
  year = {2011},
  volume = {7},
  pages = {329-343},
  url = {http://link.springer.com/article/10.1007/s11306-010-0270-3}
}
Boccard, J. and Rudaz, S. Harnessing the complexity of metabolomic data with chemometrics 2014 Journal of Chemometrics
Vol. 28, pp. 1-9 
article DOI  
BibTeX:
@article{BoRu14,
  author = {Julien Boccard and Serge Rudaz},
  title = {Harnessing the complexity of metabolomic data with chemometrics},
  journal = {Journal of Chemometrics},
  year = {2014},
  volume = {28},
  pages = {1-9},
  doi = {http://doi.org/10.1002/cem.2567}
}
Boccard, J. and Rutledge, D.N. A consensus orthogonal partial least squares discriminant analysis (OPLS-DA) strategy for multiblock Omics data fusion 2013 Analytica Chimica Acta
Vol. 769, pp. 30-39 
article DOI  
BibTeX:
@article{BoRu13,
  author = {J. Boccard and D. N. Rutledge},
  title = {A consensus orthogonal partial least squares discriminant analysis (OPLS-DA) strategy for multiblock Omics data fusion},
  journal = {Analytica Chimica Acta},
  year = {2013},
  volume = {769},
  pages = {30-39},
  doi = {http://doi.org/10.1016/j.aca.2013.01.022}
}
Boccard, J., Veuthey, J.-L. and Rudaz, S. Knowledge Discovery in metabolomics: An overview of MS data handling 2010 Journal of Separation Science
Vol. 33, pp. 290-304 
article URL 
BibTeX:
@article{BoVeRu10,
  author = {Julien Boccard and Jean-Luc Veuthey and Serge Rudaz},
  title = {Knowledge Discovery in metabolomics: An overview of MS data handling},
  journal = {Journal of Separation Science},
  year = {2010},
  volume = {33},
  pages = {290-304},
  url = {http://onlinelibrary.wiley.com/doi/10.1002/jssc.200900609/full}
}
Bouatra, S., Aziat, F., Mandal, R. and et al. null, A.C.G. The Human Urine Metabolome 2013 PLoS One
Vol. 8, pp. e73076 
article URL 
BibTeX:
@article{BoAzMa13,
  author = {S. Bouatra and F. Aziat and R. Mandal and A. C. Guo et al.},
  title = {The Human Urine Metabolome},
  journal = {PLoS One},
  year = {2013},
  volume = {8},
  pages = {e73076},
  url = {http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0073076}
}
Bro, R., Kamstrup-Nielsen, M.H., Engelsen, S.B., Savorani, F., Rasmussen, M.A., Hansen, L., Olsen, A., Tjønneland, A. and Dragsted, L.O. Forecasting individual breast cancer risk using plasma metabolomics and biocontours 2015 Metabolomics
Vol. 11, pp. 1376-1380 
article DOI  
BibTeX:
@article{Br15,
  author = {R. Bro and M. H. Kamstrup-Nielsen and S. B. Engelsen and F. Savorani and M. A. Rasmussen and L. Hansen and A. Olsen and A. Tjønneland and L. Ove Dragsted},
  title = {Forecasting individual breast cancer risk using plasma metabolomics and biocontours},
  journal = {Metabolomics},
  year = {2015},
  volume = {11},
  pages = {1376-1380},
  doi = {http://doi.org/10.1007/s11306-015-0793-8}
}
Bro, R., Nielsen, H.J., Savorani, F., Kjeldahl, K., Christensen, J., Brunner, N. and Lawaetz, A.J. Data fusion in metabolomic cancer diagnostics 2013 Metabolomics
Vol. 9, pp. 3-8 
article URL 
BibTeX:
@article{BrNiSa12,
  author = {Rasmus Bro and Hans Jørgen Nielsen and Francesco Savorani and Karin Kjeldahl and Jarle Christensen and Nils Brunner and Anders Juul Lawaetz},
  title = {Data fusion in metabolomic cancer diagnostics},
  journal = {Metabolomics},
  year = {2013},
  volume = {9},
  pages = {3-8},
  url = {http://link.springer.com/article/10.1007/s11306-012-0446-0}
}
Bylesjo, M., Eriksson, D., Kusano, M., Moritz, T. and Trygg, J. Data integration in plant biology: the O2PLS method for combined modeling of transcript and metabolite data 2007 The Plant Journal
Vol. 52, pp. 1181-1191 
article DOI  
BibTeX:
@article{ByEr07,
  author = {M. Bylesjo and D. Eriksson and M. Kusano and T. Moritz and J. Trygg},
  title = {Data integration in plant biology: the O2PLS method for combined modeling of transcript and metabolite data},
  journal = {The Plant Journal},
  year = {2007},
  volume = {52},
  pages = {1181-1191},
  doi = {http://doi.org/10.1111/j.1365-313X.2007.03293.x}
}
Chan, E.C.Y., Koh, P.K., Mal, M., Cheah, P.Y., Eu, K.W., Backshall, A., Cavill, R., Nicholson, J.K. and Keun, H.C. Metabolic Profiling of Human Colorectal Cancer Using High-Resolution Magic Angle Spinning Nuclear Magnetic Resonance (HR-MAS NMR) Spectroscopy and Gas Chromatography Mass Spectrometry (GC/MS) 2009 Journal of Proteome Research
Vol. 8, pp. 352-361 
article URL 
BibTeX:
@article{ChKoMa08,
  author = {Eric Chun Yong Chan and Poh Koon Koh and Mainak Mal and Peh Yean Cheah and Kong Weng Eu and Alexandra Backshall and Rachel Cavill and Jeremy K. Nicholson and and Hector C. Keun},
  title = {Metabolic Profiling of Human Colorectal Cancer Using High-Resolution Magic Angle Spinning Nuclear Magnetic Resonance (HR-MAS NMR) Spectroscopy and Gas Chromatography Mass Spectrometry (GC/MS)},
  journal = {Journal of Proteome Research},
  year = {2009},
  volume = {8},
  pages = {352-361},
  url = {http://pubs.acs.org/doi/abs/10.1021/pr8006232}
}
Denkert, C., Budczies, J., Kind, T., Weichert, W., Tablack, P., Sehouli, J., Niesporek, S., Konsgen, D., Dietel, M. and Fiehn, O. Mass Spectrometry–Based Metabolic Profiling Reveals Different Metabolite Patterns in Invasive Ovarian Carcinomas and Ovarian Borderline Tumors 2006 Cancer Research
Vol. 66, pp. 10795-10804 
article URL 
BibTeX:
@article{DeBuKi06,
  author = {Carsten Denkert and Jan Budczies and Tobias Kind and Wilko Weichert and Peter Tablack and Jalid Sehouli and Silvia Niesporek and Dominique Konsgen and Manfred Dietel and Oliver Fiehn},
  title = {Mass Spectrometry–Based Metabolic Profiling Reveals Different Metabolite Patterns in Invasive Ovarian Carcinomas and Ovarian Borderline Tumors},
  journal = {Cancer Research},
  year = {2006},
  volume = {66},
  pages = {10795-10804},
  url = {http://cancerres.aacrjournals.org/content/66/22/10795.short}
}
Denkert, C., Budczies, J., Weichert, W., Wohlgemuth, G., Scholz, M., Kind, T., Niesporek, S., Noske, A., Buckendahl, A., Dietel, M. and Fiehn, O. Metabolite profiling of human colon carcinoma – deregulation of TCA cycle and amino acid turnover 2008 Molecular Cancer
Vol. 7, pp. 72 
article URL 
BibTeX:
@article{DeBu08,
  author = {Carsten Denkert and Jan Budczies and Wilko Weichert and Gert Wohlgemuth and Martin Scholz and Tobias Kind and Silvia Niesporek and Aurelia Noske and Anna Buckendahl and Manfred Dietel and Oliver Fiehn},
  title = {Metabolite profiling of human colon carcinoma – deregulation of TCA cycle and amino acid turnover},
  journal = {Molecular Cancer},
  year = {2008},
  volume = {7},
  pages = {72},
  url = {http://www.molecular-cancer.com/content/7/1/72}
}
Diaz, S.O., Pinto, J., Graca, G., Duarte, I.F., Barros, A.S., Galhano, E., Pita, C., do Ceu Almeida, M., Goodfellow, B.J., Carreira, I.M. and Gil, A.M. Metabolic Biomarkers of Prenatal Disorders: An Exploratory NMR Metabonomics Study of Second Trimester Maternal Urine and Blood Plasma 2011 Journal of Proteome Research
Vol. 10, pp. 3732-3742 
article URL 
BibTeX:
@article{DiPiGr11,
  author = {S. O. Diaz and J. Pinto and G. Graca and I. F. Duarte and A. S. Barros and E. Galhano and C. Pita and M. do Ceu Almeida and B. J. Goodfellow and I. M. Carreira and A. M. Gil},
  title = {Metabolic Biomarkers of Prenatal Disorders: An Exploratory NMR Metabonomics Study of Second Trimester Maternal Urine and Blood Plasma},
  journal = {Journal of Proteome Research},
  year = {2011},
  volume = {10},
  pages = {3732-3742},
  url = {http://pubs.acs.org/doi/abs/10.1021/pr200352m}
}
Doeswijk, T.G., Hageman, J.A., Westerhuis, J.A., Tikunov, Y., Bovy, A. and van Eeuwijk, F.A. Canonical Correlation Analysis of Multiple Sensory Directed Metabolomics Data Blocks Reveals Corresponding Parts Between Data Blocks 2011 Chemometrics and Intelligent Laboratory Systems
Vol. 107, pp. 371-376 
article DOI  
BibTeX:
@article{DoHaWeTi11,
  author = {T. G. Doeswijk and J. A. Hageman and J. A. Westerhuis and Y. Tikunov and A. Bovy and F. A. van Eeuwijk},
  title = {Canonical Correlation Analysis of Multiple Sensory Directed Metabolomics Data Blocks Reveals Corresponding Parts Between Data Blocks},
  journal = {Chemometrics and Intelligent Laboratory Systems},
  year = {2011},
  volume = {107},
  pages = {371-376},
  doi = {http://doi.org/10.1016/j.chemolab.2011.05.010}
}
Floegel, A., von Ruesten, A., Drogan, D., Schulze, M., Prehn, C., Adamski, J., Pischon, T. and Boeing, H. Variation of serum metabolites related to habitual diet: a targeted metabolomic approach in EPIC-Potsdam 2013 European Journal of Clinical Nutrition
Vol. 67, pp. 1100-1108 
article DOI  
BibTeX:
@article{FlRuDr13,
  author = {A. Floegel and A. von Ruesten and D. Drogan and M.B. Schulze and C. Prehn and J. Adamski and T. Pischon and H. Boeing},
  title = {Variation of serum metabolites related to habitual diet: a targeted metabolomic approach in EPIC-Potsdam},
  journal = {European Journal of Clinical Nutrition},
  year = {2013},
  volume = {67},
  pages = {1100-1108},
  doi = {http://doi.org/10.1038/ejcn.2013.147}
}
Goodacre, R., Broadhurst, D., Smilde, A.K., Kristal, B.S., Baker, J.D., Beger, R., Bessant, C., Connor, S., Capuani, G., Craig, A., Ebbels, T., Kell, D.B., Manetti, C., Newton, J., Paternostro, G., Somorjai, R., Sjostrom, M., Trygg, J. and Wulfert, F. Proposed minimum reporting standards for data analysis in metabolomics 2007 Metabolomics
Vol. 3, pp. 231-241 
article DOI  
BibTeX:
@article{GoBrSmKr07,
  author = {Royston Goodacre and David Broadhurst and Age K. Smilde and Bruce S. Kristal and J. David Baker and Richard Beger and Conrad Bessant and Susan Connor and Giorgio Capuani and Andrew Craig and Tim Ebbels and Douglas B. Kell and Cesare Manetti and Jack Newton and Giovanni Paternostro and Ray Somorjai and Michael Sjostrom and Johan Trygg and Florian Wulfert},
  title = {Proposed minimum reporting standards for data analysis in metabolomics},
  journal = {Metabolomics},
  year = {2007},
  volume = {3},
  pages = {231-241},
  doi = {http://doi.org/10.1007/s11306-007-0081-3}
}
Goodacre, R., Vaidyanathan, S., Dunn, W.B., Harrigan, G.G. and Kell, D.B. Metabolomics by numbers: acquiring and understanding global metabolite data 2004 TRENDS in Biotechnology
Vol. 22, pp. 243-252 
article DOI  
BibTeX:
@article{Go04,
  author = {R. Goodacre and S. Vaidyanathan and W. B. Dunn and G. G. Harrigan and D. B. Kell},
  title = {Metabolomics by numbers: acquiring and understanding global metabolite data},
  journal = {TRENDS in Biotechnology},
  year = {2004},
  volume = {22},
  pages = {243-252},
  doi = {http://doi.org/10.1016/j.tibtech.2004.03.007}
}
Grapov, D., Fahrmann, J., Hwang, J., Poudel, A., Jo, J., Periwal, V., Fiehn, O. and Hara, M. Diabetes Associated Metabolomic Perturbations in NOD Mice 2015 Metabolomics
Vol. 11, pp. 425-437 
article DOI  
BibTeX:
@article{GrFaHw15,
  author = {D. Grapov and J. Fahrmann and J. Hwang and A. Poudel and J. Jo and V. Periwal and O. Fiehn and M. Hara},
  title = {Diabetes Associated Metabolomic Perturbations in NOD Mice},
  journal = {Metabolomics},
  year = {2015},
  volume = {11},
  pages = {425-437},
  doi = {http://doi.org/10.1007/s11306-014-0706-2}
}
Grapov, D., Wanichthanarak, K. and Fiehn, O. MetaMapR: pathway independent metabolomic network analysis incorporating unknowns 2015 Bioinformatics
Vol. 31(16), pp. 2757-2760 
article DOI  
BibTeX:
@article{GrWaFi15,
  author = {D. Grapov and K. Wanichthanarak and O. Fiehn},
  title = {MetaMapR: pathway independent metabolomic network analysis incorporating unknowns},
  journal = {Bioinformatics},
  year = {2015},
  volume = {31},
  number = {16},
  pages = {2757-2760},
  doi = {http://doi.org/10.1093/bioinformatics/btv194}
}
Griffin, J.L. and Shockcor, J.P. Metabolic Profiles of Cancer Cells 2004 Nature Reviews Cancer
Vol. 4, pp. 551-561 
article URL 
BibTeX:
@article{GrSh04,
  author = {J. L. Griffin and J. P. Shockcor},
  title = {Metabolic Profiles of Cancer Cells},
  journal = {Nature Reviews Cancer},
  year = {2004},
  volume = {4},
  pages = {551-561},
  url = {http://www.nature.com/nrc/journal/v4/n7/abs/nrc1390.html}
}
Gurdeniz, G., Hansen, L., Rasmussen, M.A., Acar, E., Olsen, A., Christensen, J., Barri, T., Tjonneland, A. and Dragsted, L.O. Patterns of time since last meal revealed by sparse PCA in an observational LC–MS based metabolomics study 2013 Metabolomics, pp. 1-9  article DOI  
BibTeX:
@article{2013_GuHaRa13,
  author = {G. Gurdeniz and L. Hansen and M. A. Rasmussen and E. Acar and A. Olsen and J. Christensen and T. Barri and A. Tjonneland and L. O. Dragsted},
  title = {Patterns of time since last meal revealed by sparse PCA in an observational LC–MS based metabolomics study},
  journal = {Metabolomics},
  year = {2013},
  pages = {1-9},
  doi = {http://doi.org/10.1007/s11306-013-0525-x}
}
Hanhineva, K., Lankinen, M.A., Pedret, A., Schwab, U., Kolehmainen, M., Paananen, J., de Mello, V., Sola, R., Lehtonen, M., Poutanen, K., Uusitupa, M. and Mykkanen, H. Nontargeted Metabolite Profiling Discriminates Diet-Specific Biomarkers for Consumption of Whole Grains, Fatty Fish, and Bilberries in a Randomized Controlled Trial 2015 The Journal of Nutrition
Vol. 145, pp. 7-17 
article DOI  
BibTeX:
@article{HaLa14,
  author = {K. Hanhineva and M. A. Lankinen and A. Pedret and U. Schwab and M. Kolehmainen and J. Paananen and V. de Mello and R. Sola and M. Lehtonen and K. Poutanen and M. Uusitupa and H. Mykkanen},
  title = {Nontargeted Metabolite Profiling Discriminates Diet-Specific Biomarkers for Consumption of Whole Grains, Fatty Fish, and Bilberries in a Randomized Controlled Trial},
  journal = {The Journal of Nutrition},
  year = {2015},
  volume = {145},
  pages = {7-17},
  doi = {http://doi.org/10.3945/jn.114.196840}
}
Hassani, S., Martens, H., Qannari, E.M., Hanafi, M., Borge, G.I. and Kohler, A. Analysis of -omics data: Graphical interpretation and validation tools in multi-block methods 2010 Chemometrics and Intelligent Laboratory Systems
Vol. 104, pp. 140-153 
article DOI  
BibTeX:
@article{HaMaQaHaBoKo10,
  author = {S. Hassani and H. Martens and E. M. Qannari and M. Hanafi and G. I. Borge and A. Kohler},
  title = {Analysis of -omics data: Graphical interpretation and validation tools in multi-block methods},
  journal = {Chemometrics and Intelligent Laboratory Systems},
  year = {2010},
  volume = {104},
  pages = {140-153},
  doi = {http://doi.org/10.1016/j.chemolab.2010.08.008}
}
Hendriks, M.M., van Eeuwijk, F.A., Jellema, R.H., Westerhuis, J.A., Reijmers, T.H., Hoefsloot, H.C. and Smilde, A.K. Data-processing strategies for metabolomics studies 2011 Trends in Analytical Chemistry
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@article{HeEeJe11,
  author = {Margriet M.W.B. Hendriks and Fred A. van Eeuwijk and Renger H. Jellema and Johan A. Westerhuis and Theo H. Reijmers and Huub C.J. Hoefsloot and Age K. Smilde},
  title = {Data-processing strategies for metabolomics studies},
  journal = {Trends in Analytical Chemistry},
  year = {2011},
  volume = {30},
  pages = {1685-1698},
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}
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article DOI  
BibTeX:
@article{JoIvSi16,
  author = {Caroline H. Johnson and Julijana Ivanisevic and Gary Siuzdak},
  title = {Metabolomics: beyond biomarkers and towards mechanisms},
  journal = {Nature Reviews Molecular Cell Biology},
  year = {2016},
  volume = {17},
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}
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article DOI  
BibTeX:
@article{KhAmBa12,
  author = {Bekzod Khakimov and José Manuel Amigo and Søren Bak and Søren Balling Engelsen},
  title = {Plant metabolomics: Resolution and quantification of elusive peaks in liquid chromatography–mass spectrometry profiles of complex plant extracts using multi-way decomposition methods},
  journal = {Journal of Chromatography A},
  year = {2012},
  volume = {1266},
  pages = {84-94},
  doi = {http://doi.org/10.1016/j.chroma.2012.10.023}
}
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article DOI  
BibTeX:
@article{KhPo16,
  author = {B. Khakimov and S. K. Poulsen and F. Savorani and E. Acar and G. Gürdeniz and T. M. Larsen and A. Astrup and L. O. Dragsted and S. B. Engelsen},
  title = {New Nordic Diet versus Average Danish Diet: A Randomized Controlled Trial Revealed Healthy Long-Term Effects of the New Nordic Diet by GC–MS Blood Plasma Metabolomics},
  journal = {Journal of Proteome Research},
  year = {2016},
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}
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article URL 
BibTeX:
@article{KiToFiWe07,
  author = {Tobias Kind and Vladimir Tolstikov and Oliver Fiehn and Robert H. Weiss},
  title = {A comprehensive urinary metabolomic approach for identifying kidney cancer},
  journal = {Analytical Biochemistry},
  year = {2007},
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  pages = {185-195},
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}
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Vol. 8, pp. 111-121 
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BibTeX:
@article{LaBrNi11,
  author = {Anders Juul Lawaetz and Rasmus Bro and Maja Kamstrup-Nielsen and Ib Jarle Christensen and Lars N. Jørgensen and Hans J. Nielsen},
  title = {Fluorescence spectroscopy as a potential metabonomic tool for early detection of colorectal cancer},
  journal = {Metabolomics},
  year = {2012},
  volume = {8},
  pages = {111-121},
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}
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article URL 
BibTeX:
@article{LuWaMa09,
  author = {C. Ludwig and D. G. Ward and A. Martin and M. R. Viant and T. Ismail and P. J. Johnson and M. J. O. Wakelamd and U. L. Gunther},
  title = {Fast targeted multidimensional NMR metabolomics of colorectal cancer},
  journal = {Magnetic Resonance in Chemistry},
  year = {2009},
  volume = {47 (Supp.)},
  pages = {S68–S73},
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}
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article URL 
BibTeX:
@article{MaLiPe10,
  author = {Yanlei Ma and Weijie Liu and Jiayuan Peng and Long Huang and Peng Zhang and Xiaoping Zhao and Yiyu Cheng and Huanlong Qin},
  title = {A pilot study of gas chromatograph/mass spectrometry-based serum metabolic profiling of colorectal cancer after operation},
  journal = {Molecular Biology Reports},
  year = {2010},
  volume = {37},
  pages = {1403-1411},
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}
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article URL 
BibTeX:
@article{MaLuTr10,
  author = {Rasmus Madsen and Torbjörn Lundstedt and Johan Trygg},
  title = {Chemometrics in metabolomics—A review in human disease diagnosis},
  journal = {Analytica Chimica Acta},
  year = {2010},
  volume = {659},
  pages = {23-33},
  url = {http://www.sciencedirect.com/science/article/pii/S0003267009015530}
}
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article URL 
BibTeX:
@article{MaKoChCh09,
  author = {Mainak Mal and Poh Koon Koh and Peh Yean Cheah and Eric Chun Yong Chan},
  title = {Development and validation of a gas chromatography/mass spectrometry method for the metabolic profiling of human colon tissue},
  journal = {Rapid Communications in Mass Spectrometry},
  year = {2009},
  volume = {23},
  pages = {487-494},
  url = {http://onlinelibrary.wiley.com/doi/10.1002/rcm.3898/abstract?deniedAccessCustomisedMessage=&userIsAuthenticated=false}
}
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Vol. 7, pp. 572-582 
article URL 
BibTeX:
@article{MaRo11,
  author = {R. Mallol and M. A. Rodriguez and M. Heras and M. Vinaixa and N. Canellas and J. Brezmes and N. Plana and L. Masana and X. Correig},
  title = {Surface fitting of 2D diffusion-edited 1H NMR spectroscopy data for the characterisation of human plasma lipoproteins},
  journal = {Metabolomics},
  year = {2011},
  volume = {7},
  pages = {572-582},
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}
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Vol. 85, pp. 5-17 
article DOI  
BibTeX:
@article{MaDuNeGo11,
  author = {Mamas Mamas and Warwick B. Dunn and Ludwig Neyses and Royston Goodacre},
  title = {The role of metabolites and metabolomics in clinically applicable biomarkers of disease},
  journal = {Archives of Toxicology},
  year = {2011},
  volume = {85},
  pages = {5-17},
  doi = {http://doi.org/10.1007/s00204-010-0609-6}
}
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Vol. 9, pp. 506-514 
article DOI  
BibTeX:
@article{MeZhMc13,
  author = {C. Menni and G. Zhai and A. MacGregor and C. Prehn and W. Romisch-Margl and K.n Suhre and J. Adamski and A. Cassidy and T. Illig and T. D. Spector and A. M. Valdes},
  title = {Targeted metabolomics profiles are strongly correlated with nutritional patterns in women},
  journal = {Metabolomics},
  year = {2013},
  volume = {9},
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}
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BibTeX:
@article{NaGuMi10,
  author = {Prashant R. Nambiara and Rishi R. Gupta and Vikas Misrac},
  title = {An “Omics” based survey of human colon cancer},
  journal = {Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis},
  year = {2010},
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}
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article DOI  
BibTeX:
@article{NiXiJi14,
  author = {Y. Ni and G. Xie and W. Jia},
  title = {Metabonomics of Human Colorectal Cancer: New Approaches for Early Diagnosis and Biomarker Discovery},
  journal = {Journal of Proteome Research},
  year = {2014},
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}
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@article{NoSoHa07,
  author = {Lars Nørgaard and Gyorgy Soletormos and Niels Harrit and Morten Albrechtsen and Ole Olsen and Dorte Nielsen and Kristoffer Kampmann and Rasmus Bro},
  title = {Fluorescence spectroscopy and chemometrics for classification of breast cancer samples—a feasibility study using extended canonical variates analysis},
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@article{OaTeBi11,
  author = {Catherine Oakman and Leonardo Tenori and Laura Biganzoli and Libero Santarpia and Silvia Cappadona and Claudio Luchinat and Angelo Di Leo},
  title = {Uncovering the metabolomic fingerprint of breast cancer},
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  pages = {1010-1020},
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}
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@article{OdWoAmHu05,
  author = {K. Odunsi and R. M. Wollman and C. B. Ambrosone and A. Hutson and S. E. McCann and J. Tammela and J. P. Geisler and G. Miller and T. Sellers and W. Cliby and F. Qian and B. Keitz and M. Intengan and S. Lele and J. L. Alderfer},
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@article{OnZoLi10,
  author = {Eng Shi Ong and Li Zou and Shaoxia Li and Peh Yean Cheah and Kong Weng Eu and Choon Nam Ong},
  title = {Metabolic profiling in colorectal cancer reveals signature metabolic shifts during tumorigenesis},
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}
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article DOI  
BibTeX:
@article{SuGiBr11,
  author = {A. O’Sullivan and M. J. Gibney and L. Brennan},
  title = {Dietary intake patterns are reflected in metabolomic profiles: potential role in dietary assessment studies},
  journal = {The American Journal of Clinical Nutrition},
  year = {2011},
  volume = {93},
  pages = {314-321},
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}
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BibTeX:
@article{PaHoCh08,
  author = {Kishore K. Pasikanti and P.C. Ho and E.C.Y. Chan},
  title = {Gas chromatography/mass spectrometry in metabolic profiling of biological fluids},
  journal = {Journal of Chromatography B},
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  pages = {202-211},
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}
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article URL 
BibTeX:
@article{PoMoBiLaMaDr11,
  author = {M. Poulsen and A. Mortensen and M. L. Binderup and S. Langkilde and J. Markowski and L. O. Dragsted},
  title = {The Effect of Apple Feeding on Markers of Colon Carcinogenesis},
  journal = {Nutrition and Cancer},
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  volume = {63},
  pages = {402-409},
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}
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article DOI  
BibTeX:
@article{PoDuJo14,
  author = {S. K. Poulsen and A. Due and A. B Jordy and B. Kiens and K. D. Stark and S. Stender and C. Holst and A. Astrup and T. M. Larsen},
  title = {Health effect of the New Nordic Diet in adults with increased waist circumference: a 6-mo randomized controlled trial},
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}
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Vol. 9, pp. 1627-1634 
article URL 
BibTeX:
@article{QiCaSu10,
  author = {Yunping Qiu and Guoxiang Cai and Mingming Su and Tianlu Chen and Yumin Liu and Ye Xu and Yan Ni and Aihua Zhao and Sanjun Cai and Lisa X. Xu and Wei Jia},
  title = {Urinary Metabonomic Study on Colorectal Cancer},
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  year = {2010},
  volume = {9},
  pages = {1627-1634},
  url = {http://pubs.acs.org/doi/abs/10.1021/pr901081y}
}
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Vol. 8, pp. 4844-4850 
article URL 
BibTeX:
@article{QiCaSu09,
  author = {Yunping Qiu and Guoxiang Cai and Mingming Su and Tianlu Chen and Xiaojiao Zheng and Ye Xu and Yan Ni and Aihua Zhao and Lisa X. Xu and Sanjun Cai and Wei Jia},
  title = {Serum Metabolite Profiling of Human Colorectal Cancer Using GC-TOFMS and UPLC-QTOFMS},
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}
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BibTeX:
@article{RiDuFoEbHoNi10,
  author = {Selena E. Richards and Marc-Emmanuel Dumas and Judith M. Fonville and Timothy M.D. Ebbels and Elaine Holmes and Jeremy K. Nicholson},
  title = {Intra- and inter-omic fusion of metabolic profiling data in a systems biology framework},
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  pages = {121-131},
  url = {http://www.sciencedirect.com/science/article/pii/S0169743910001371}
}
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Vol. 5, pp. 435-458 
article URL 
BibTeX:
@article{ScBr09,
  author = {Augustin Scalbert and Lorraine Brennan and Oliver Fiehn and Thomas Hankemeier and Bruce S. Kristal and Ben van Ommen and Estelle Pujos-Guillot and Elwin Verheij and David Wishart and Suzan Wopereis},
  title = {Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research},
  journal = {Metabolomics},
  year = {2009},
  volume = {5},
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}
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article URL 
BibTeX:
@article{SeGl09,
  author = {Natalie J. Serkova and Kristine Glunde},
  title = {Metabolomics of Cancer},
  journal = {Methods in Molecular Biology, Tumor Biomarker Discovery},
  year = {2009},
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  pages = {273-295},
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}
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article DOI  
BibTeX:
@article{SmWeBi05,
  author = {A. K. Smilde and M. J. van der Werf and S. Bijlsma and B. J. C. van der Werf and R. Jellema},
  title = {Fusion of Mass Spectrometry-Based Metabolomics Data},
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}
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article DOI  
BibTeX:
@article{SmBlCo12,
  author = {A. Smolinska and L. Blanchet and L. Coulier and K. A. M. Ampt and T. Luider and R. Q. Hintzen and S. S. Wijmenga and L. M. C. Buydens},
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}
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BibTeX:
@article{SrPo09,
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article DOI  
BibTeX:
@article{Tj10,
  author = {Harold Tjalsma},
  title = {Identification of biomarkers for colorectal cancer through proteomics-based approaches},
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article URL 
BibTeX:
@article{VaVeIs11,
  author = {Que N. Van and Timothy D. Veenstra and Haleem J. Issaq},
  title = {Metabolic Profiling for the Detection of Bladder Cancer},
  journal = {Current Urology Reports},
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  pages = {34-40},
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}
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BibTeX:
@article{WaFa15,
  author = {K. Wanichthanarak and J. F. Fahrmann and D. Grapov},
  title = {Genomic, Proteomic, and Metabolomic Data Integration Strategies},
  journal = {Biomarker Insights},
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BibTeX:
@article{Wi08,
  author = {David S. Wishart},
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  year = {2008},
  volume = {27},
  pages = {228-237},
  url = {http://www.sciencedirect.com/science/article/pii/S0165993607002622}
}
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BibTeX:
@article{WiLe08,
  author = {D. S. Wishart and M. J. Lewis and J. A. Morrissey and M. D. Flegel and K. Jeroncic and Y. Xiong and D. Cheng and R. Eisner and B. Gautam and D. Tzur and S. Sawhney and F. Bamforth and R. Greiner and L. Li},
  title = {The human cerebrospinal fluid metabolome},
  journal = {Journal of Chromatography B},
  year = {2008},
  volume = {871},
  pages = {164-173},
  url = {http://www.sciencedirect.com/science/article/pii/S1570023208002936#}
}
Zeevi, D., Korem, T. and et al. null, N.Z. Personalized Nutrition by Prediction of Glycemic Responses 2015 Cell
Vol. 163, pp. 1079-1094 
article DOI  
BibTeX:
@article{ZeKo15,
  author = {D. Zeevi and T. Korem and N. Zmora et al.},
  title = {Personalized Nutrition by Prediction of Glycemic Responses},
  journal = {Cell},
  year = {2015},
  volume = {163},
  pages = {1079-1094},
  doi = {http://doi.org/10.1016/j.cell.2015.11.001}
}